Document Type

Data set

Publication Date

6-2017

Description

Each folder includes the following files.

  1. Assembly.fa: Genome assembly in scaffolds.
  2. Blast2GO_results.b2g: The full annotation of coding sequences.
  3. Coding_sequences.fa: The predicted coding sequences from masked assembly.
  4. Gene_models.gff: Gene predictions from masked assembly.
  5. Masked_assembly.fa: The masked genome assembly.
  6. Protein.fa: The predicted protein sequences.

PLAT_d and PLAT*_GC contains chromosomal assembly as “chr_assembly.fa” in respective folder.

SnpEff folder contains results from SnpEff as SnpEff_summary, genes affected are described as vini_snp.txt.genes and vini_snpeff is output from SnpEff.

File Format(s)

FASTA format

Rights

Copyright 2017 © the Author(s)

Comments

The downloadable Zip file containing all data sets and files is 1.4 GB.

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